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1.
Zootaxa ; 4980(3): 401450, 2021 Jun 02.
Artigo em Inglês | MEDLINE | ID: mdl-34186970

RESUMO

Recent expeditions to Rapa Nui (also known as Easter Island) and New Caledonia have revealed undescribed species from mesophotic and deeper depths. This includes three new species from Rapa Nui, Hacelia raaraa, Linckia profunda (Ophidiasteridae), Uokeaster ahi (Asterodiscididae) and two new species from New Caledonia, Astroglypha pyramidata n. gen. and Ophidiaster colossus (Ophidiasteridae). The new genus Astroglypha is described for A. pyramidata but the genus also includes the Atlantic Tamaria passiflora, which is reassigned herein. Pauliastra n. gen. is designated as a replacement for the homonym issue with Pauliella. New occurrences and synonymies are addressed for taxa related to New Caledonia, Rapa Nui and adjacent regions. A morphology based phylogenetic analysis agrees with prior work which placed Goniaster among the Asterodiscididae and posits biogeographic relationships among asterodiscidid genera. Implications for the Goniasteridae and placement of Goniaster among asterodiscidid genera are discussed. Biogeography and relationships among taxa from Rapa Nui and New Caledonia are reviewed. In situ observations from species observed from Rapa Nui are included.


Assuntos
Estrelas-do-Mar , Distribuição Animal , Animais , Nova Caledônia , Filogenia , Polinésia , Estrelas-do-Mar/classificação
2.
Open Biol ; 10(9): 200172, 2020 09.
Artigo em Inglês | MEDLINE | ID: mdl-32898470

RESUMO

Somatostatin (SS) and allatostatin-C (ASTC) are structurally and evolutionarily related neuropeptides that act as inhibitory regulators of physiological processes in mammals and insects, respectively. Here, we report the first molecular and functional characterization of SS/ASTC-type signalling in a deuterostome invertebrate-the starfish Asterias rubens (phylum Echinodermata). Two SS/ASTC-type precursors were identified in A. rubens (ArSSP1 and ArSSP2) and the structures of neuropeptides derived from these proteins (ArSS1 and ArSS2) were analysed using mass spectrometry. Pharmacological characterization of three cloned A. rubens SS/ASTC-type receptors (ArSSR1-3) revealed that ArSS2, but not ArSS1, acts as a ligand for all three receptors. Analysis of ArSS2 expression in A. rubens using mRNA in situ hybridization and immunohistochemistry revealed stained cells/fibres in the central nervous system, the digestive system (e.g. cardiac stomach) and the body wall and its appendages (e.g. tube feet). Furthermore, in vitro pharmacological tests revealed that ArSS2 causes dose-dependent relaxation of tube foot and cardiac stomach preparations, while injection of ArSS2 in vivo causes partial eversion of the cardiac stomach. Our findings provide new insights into the molecular evolution of SS/ASTC-type signalling in the animal kingdom and reveal an ancient role of SS-type neuropeptides as inhibitory regulators of muscle contractility.


Assuntos
Equinodermos/metabolismo , Transdução de Sinais , Somatostatina/metabolismo , Sequência de Aminoácidos , Animais , Clonagem Molecular , Equinodermos/classificação , Equinodermos/genética , Evolução Molecular , Expressão Gênica , Ordem dos Genes , Imuno-Histoquímica , Hibridização In Situ , Relaxamento Muscular/efeitos dos fármacos , Neuropeptídeos/química , Neuropeptídeos/genética , Neuropeptídeos/metabolismo , Neuropeptídeos/farmacologia , Peptídeos/química , Peptídeos/genética , Peptídeos/metabolismo , Peptídeos/farmacologia , Filogenia , Transporte Proteico , RNA Mensageiro/genética , RNA Mensageiro/metabolismo , Alinhamento de Sequência , Somatostatina/química , Somatostatina/genética , Estrelas-do-Mar/classificação , Estrelas-do-Mar/genética , Estrelas-do-Mar/metabolismo
3.
Sci Rep ; 10(1): 8184, 2020 05 18.
Artigo em Inglês | MEDLINE | ID: mdl-32424321

RESUMO

The corallivorous Crown-of-Thorns Starfish (CoTS, Acanthaster spp.) has been linked with the widespread loss of scleractinian coral cover on Indo-Pacific reefs during periodic population outbreaks. Here, we re-examine CoTS consumption by coral reef fish species by using new DNA technologies to detect Pacific Crown-of-Thorns Starfish (Acanthaster cf. solaris) in fish faecal and gut content samples. CoTS DNA was detected in samples from 18 different coral reef fish species collected on reefs at various stages of CoTS outbreaks in the Great Barrier Reef Marine Park, nine of which had not been previously reported to feed on CoTS. A comprehensive set of negative and positive control samples confirmed that our collection, processing and analysis procedures were robust, although food web transfer of CoTS DNA cannot be ruled out for some fish species. Our results, combined with the (i) presence of CoTS spines in some samples, (ii) reported predation on CoTS gametes, larvae and settled individuals, and (iii) known diet information for fish species examined, strongly indicate that direct fish predation on CoTS may well be more common than is currently appreciated. We provide recommendations for specific management approaches to enhance predation on CoTS by coral reef fishes, and to support the mitigation of CoTS outbreaks and reverse declines in hard coral cover.


Assuntos
Código de Barras de DNA Taxonômico , Fezes , Intestinos , Estrelas-do-Mar/classificação , Estrelas-do-Mar/genética , Animais , Recifes de Corais , Comportamento Predatório
4.
J Biol Chem ; 295(10): 3173-3188, 2020 03 06.
Artigo em Inglês | MEDLINE | ID: mdl-32001617

RESUMO

Echinoderms are among the most primitive deuterostomes and have been used as model organisms to understand chordate biology because of their close evolutionary relationship to this phylogenetic group. However, there are almost no data available regarding the N-glycomic capacity of echinoderms, which are otherwise known to produce a diverse set of species-specific glycoconjugates, including ones heavily modified by fucose, sulfate, and sialic acid residues. To increase the knowledge of diversity of carbohydrate structures within this phylum, here we conducted an in-depth analysis of N-glycans from a brittle star (Ophiactis savignyi) as an example member of the class Ophiuroidea. To this end, we performed a multi-step N-glycan analysis by HPLC and various exoglyosidase and chemical treatments in combination with MALDI-TOF MS and MS/MS. Using this approach, we found a wealth of hybrid and complex oligosaccharide structures reminiscent of those in higher vertebrates as well as some classical invertebrate glycan structures. 70% of these N-glycans were anionic, carrying either sialic acid, sulfate, or phosphate residues. In terms of glycophylogeny, our data position the brittle star between invertebrates and vertebrates and confirm the high diversity of N-glycosylation in lower organisms.


Assuntos
Glicômica/métodos , Polissacarídeos/química , Estrelas-do-Mar/metabolismo , Animais , Sequência de Carboidratos , Cromatografia Líquida de Alta Pressão , Glicosídeo Hidrolases/metabolismo , Glicosilação , Oligossacarídeos/química , Filogenia , Polissacarídeos/classificação , Polissacarídeos/metabolismo , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz , Estrelas-do-Mar/classificação
5.
PLoS One ; 15(1): e0227223, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-31910238

RESUMO

Several starfish (Echinodermata, Asteroidea) are keystone species of marine ecosystems, but some of the species are difficult to identify using morphological criteria only. The common sunstar, Crossaster papposus (Linnaeus, 1767), is a conspicuous species with a wide circumboreal distribution. In 1900, a closely similar species, C. squamatus (Döderlein, 1900) was described from the NE Atlantic Ocean, but subsequent authors have differed in their views on whether this is a valid taxon or rather an ecotype associated with temperature variations. We assessed the differentiating morphological characters of specimens from Norwegian and Greenland waters identified as C. papposus and C. squamatus and compared their distributions in the NE Atlantic as inferred from research cruises. The field data show that C. papposus is found mainly in temperate and shallow waters, whereas C. squamatus resides on the shelf-break in colder, mixed water masses. Intraspecific diversity and interspecific genetic differentiation of the two putative species, and their phylogenetic relationships to several Crossaster congeners worldwide, were explored using mitochondrial and nuclear DNA sequences. The molecular evidence suggests that C. papposus is the more diverse and geographically structured taxon, in line with its wide distribution. C. papposus and C. squamatus are closely related, yet clearly distinct taxa, while C. papposus and C. multispinus H.L. Clark, 1916, the latter from the South Pacific Ocean, are closely related, possibly sister taxa.


Assuntos
Distribuição Animal , Estrelas-do-Mar/genética , Animais , Oceano Atlântico , Núcleo Celular/genética , DNA Mitocondrial/genética , DNA Mitocondrial/isolamento & purificação , Groenlândia , Noruega , Oceano Pacífico , Filogenia , Análise de Sequência de DNA , Estrelas-do-Mar/classificação , Temperatura
6.
Biol Bull ; 236(3): 174-185, 2019 06.
Artigo em Inglês | MEDLINE | ID: mdl-31167087

RESUMO

Two juvenile specimens of a new species of Oreaster were collected at Parque Nacional Arrecife Alacranes and Triángulos Oeste in the southern Gulf of Mexico. DNA of mitochondrial loci identifies them as members of the same clade as cloning larvae of Oreaster found abundantly in waters of the Florida Current-Gulf Stream system, and distinct from Oreaster clavatus and Oreaster reticulatus, the two known Oreasteridae species in the North Atlantic. Larvae from the new species of Oreaster persist as clones but also metamorphose and settle to the benthos with typical asteroid morphology.


Assuntos
Estrelas-do-Mar/classificação , Estrelas-do-Mar/crescimento & desenvolvimento , Animais , Golfo do México , Larva/classificação , Larva/crescimento & desenvolvimento , Metamorfose Biológica , Polimorfismo de Nucleotídeo Único , Análise de Sequência de DNA , Especificidade da Espécie , Estrelas-do-Mar/genética
7.
Mol Phylogenet Evol ; 115: 161-170, 2017 10.
Artigo em Inglês | MEDLINE | ID: mdl-28757447

RESUMO

Multi-locus phylogenetic studies of echinoderms based on Sanger and RNA-seq technologies and the fossil record have provided evidence for the Asterozoa-Echinozoa hypothesis. This hypothesis posits a sister relationship between asterozoan classes (Asteroidea and Ophiuroidea) and a similar relationship between echinozoan classes (Echinoidea and Holothuroidea). Despite this consensus around Asterozoa-Echinozoa, phylogenetic relationships within the class Asteroidea (sea stars or starfish) have been controversial for over a century. Open questions include relationships within asteroids and the status of the enigmatic taxon Xyloplax. Xyloplax is thought by some to represent a newly discovered sixth class of echinoderms - and by others to be an asteroid. To address these questions, we applied a novel workflow to a large RNA-seq dataset that encompassed a broad taxonomic and genomic sample. This study included 15 species sampled from all extant orders and 13 families, plus four ophiuroid species as an outgroup. To expand the taxonomic coverage, the study also incorporated five previously published transcriptomes and one previously published expressed sequence tags (EST) dataset. We developed and applied methods that used a range of alignment parameters with increasing permissiveness in terms of gap characters present within an alignment. This procedure facilitated the selection of phylogenomic data subsets from large amounts of transcriptome data. The results included 19 nested data subsets that ranged from 37 to 4,281loci. Tree searches on all data subsets reconstructed Xyloplax as a velatid asteroid rather than a new class. This result implies that asteroid morphology remains labile well beyond the establishment of the body plan of the group. In the phylogenetic tree with the highest average asteroid nodal support several monophyletic groups were recovered. In this tree, Forcipulatida and Velatida are monophyletic and form a clade that includes Brisingida as sister to Forcipulatida. Xyloplax is consistently recovered as sister to Pteraster. Paxillosida and Spinulosida are each monophyletic, with Notomyotida as sister to the Paxillosida. Valvatida is recovered as paraphyletic. The results from other data subsets are largely consistent with these results. Our results support the hypothesis that the earliest divergence event among extant asteroids separated Velatida and Forcipulatacea from Valvatacea and Spinulosida.


Assuntos
Estrelas-do-Mar/classificação , Transcriptoma , Animais , Etiquetas de Sequências Expressas , Filogenia , RNA/química , RNA/isolamento & purificação , RNA/metabolismo , Alinhamento de Sequência , Análise de Sequência de RNA , Estrelas-do-Mar/genética
8.
Sci Rep ; 7(1): 2173, 2017 05 19.
Artigo em Inglês | MEDLINE | ID: mdl-28526851

RESUMO

The vast majority of marine invertebrates spend their larval period as pelagic plankton and are exposed to various environmental cues. Here we investigated the thermotaxis behaviors of the bipinnaria larvae of the starfish, Patiria pectinifera, in association with TRPA ion channels that serve as thermal receptors in various animal species. Using a newly developed thermotaxis assay system, we observed that P. pectinifera larvae displayed positive thermotaxis toward high temperatures, including toward temperatures high enough to cause death. In parallel, we identified two TRPA genes, termed PpTRPA1 and PpTRPA basal, from this species. We examined the phylogenetic position, spatial expression, and channel properties of each PpTRPA. Our results revealed the following: (1) The two genes diverged early in animal evolution; (2) PpTRPA1 and PpTRPA basal are expressed in the ciliary band and posterior digestive tract of the larval body, respectively; and (3) PpTRPA1 is activated by heat stimulation as well as by known TRPA1 agonists. Moreover, knockdown and rescue experiments demonstrated that PpTRPA1 is involved in positive thermotaxis in P. pectinifera larvae. This is the first report to reveal that TRPA1 channels regulate the behavioral response of a marine invertebrate to temperature changes during its planktonic larval period.


Assuntos
Estrelas-do-Mar/genética , Estrelas-do-Mar/metabolismo , Canais de Potencial de Receptor Transitório/genética , Canais de Potencial de Receptor Transitório/metabolismo , Animais , Expressão Gênica , Técnicas de Silenciamento de Genes , Larva , Família Multigênica , Filogenia , Plâncton , Estrelas-do-Mar/classificação , Resposta Táctica
9.
Zootaxa ; 4175(2): 101-141, 2016 Oct 12.
Artigo em Inglês | MEDLINE | ID: mdl-27811777

RESUMO

Research cruises by the Monterey Bay Aquarium Research Institute (MBARI) have resulted in the discovery of three new species of asteroids from the lower bathyal/abyssal regions of the North Pacific. A new genus, Bathyceramaster is described to accommodate "Mediaster" elegans Ludwig 1905 and related species. New records and in situ observations are also presented. An identification key and taxonomic account of the deep-sea Goniasteridae known from this region including one new genus and two new species is included. An overview of the genus Sibogaster, including a new widely occurring species, is also included.


Assuntos
Estrelas-do-Mar/anatomia & histologia , Estrelas-do-Mar/classificação , Animais , Oceano Pacífico , Especificidade da Espécie
10.
PLoS One ; 11(10): e0165552, 2016.
Artigo em Inglês | MEDLINE | ID: mdl-27798700

RESUMO

The coral reef sea star Linckia laevigata is common on shallow water coral reefs of the Indo-West Pacific. Its large geographic distribution and comprehensive data from previous studies makes it suitable to examine genetic differentiation and connectivity over large geographical scales. Based on partial sequences of the mitochondrial cytochrome oxidase I (COI) gene this study investigates the genetic population structure and connectivity of L. laevigata in the Western Indian Ocean (WIO) and compares it to previous studies in the Indo-Malay-Philippines Archipelago (IMPA). A total of 138 samples were collected from nine locations in the WIO. AMOVA revealed a low but significant ΦST-value of 0.024 for the WIO populations. In the hierarchical AMOVA, the following grouping rejected the hypothesis of panmixia: (1) Kenya (Watamu, Mombasa, Diani) and Tanzanian Island populations (Misali and Jambiani) and (2) the rest of the WIO sites (mainland Tanzania and Madagascar; ΦCT = 0.03). The genetic population structure was stronger and more significant (ΦST = 0.13) in the comparative analysis of WIO and IMPA populations. Three clades were identified in the haplotype network. The strong genetic differentiation (ΦCT = 0.199, P < 0.001) suggests that Indo-West Pacific populations of L. laevigata can be grouped into four biogeographic regions: (1) WIO (2) Eastern Indian Ocean (3) IMPA and (4) Western Pacific. The findings of this study support the existence of a genetic break in the Indo-West Pacific consistent with the effect of lowered sea level during the Pleistocene, which limited gene flow between the Pacific and Indian Ocean.


Assuntos
Recifes de Corais , Genética Populacional , Filogenia , Estrelas-do-Mar/classificação , Estrelas-do-Mar/genética , Animais , DNA Mitocondrial , Variação Genética , Geografia , Oceano Índico , Oceano Pacífico
11.
Sci Rep ; 6: 28788, 2016 06 28.
Artigo em Inglês | MEDLINE | ID: mdl-27350121

RESUMO

Gonadotropin-releasing hormone (GnRH) is a key regulator of reproductive maturation in humans and other vertebrates. Homologs of GnRH and its cognate receptor have been identified in invertebrates-for example, the adipokinetic hormone (AKH) and corazonin (CRZ) neuropeptide pathways in arthropods. However, the precise evolutionary relationships and origins of these signalling systems remain unknown. Here we have addressed this issue with the first identification of both GnRH-type and CRZ-type signalling systems in a deuterostome-the echinoderm (starfish) Asterias rubens. We have identified a GnRH-like neuropeptide (pQIHYKNPGWGPG-NH2) that specifically activates an A. rubens GnRH-type receptor and a novel neuropeptide (HNTFTMGGQNRWKAG-NH2) that specifically activates an A. rubens CRZ-type receptor. With the discovery of these ligand-receptor pairs, we demonstrate that the vertebrate/deuterostomian GnRH-type and the protostomian AKH systems are orthologous and the origin of a paralogous CRZ-type signalling system can be traced to the common ancestor of the Bilateria (Urbilateria).


Assuntos
Hormônio Liberador de Gonadotropina/metabolismo , Proteínas de Insetos/metabolismo , Invertebrados/metabolismo , Neuropeptídeos/metabolismo , Transdução de Sinais , Vertebrados/metabolismo , Sequência de Aminoácidos , Animais , Evolução Molecular , Hormônio Liberador de Gonadotropina/genética , Hormônios de Inseto/genética , Hormônios de Inseto/metabolismo , Proteínas de Insetos/genética , Invertebrados/classificação , Invertebrados/genética , Neuropeptídeos/genética , Oligopeptídeos/genética , Oligopeptídeos/metabolismo , Filogenia , Ácido Pirrolidonocarboxílico/análogos & derivados , Ácido Pirrolidonocarboxílico/metabolismo , Receptores LHRH/classificação , Receptores LHRH/genética , Receptores LHRH/metabolismo , Receptores de Neuropeptídeos/classificação , Receptores de Neuropeptídeos/genética , Receptores de Neuropeptídeos/metabolismo , Homologia de Sequência de Aminoácidos , Estrelas-do-Mar/classificação , Estrelas-do-Mar/genética , Estrelas-do-Mar/metabolismo , Vertebrados/classificação , Vertebrados/genética
12.
Open Biol ; 6(2): 150224, 2016 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-26865025

RESUMO

Neuropeptides are evolutionarily ancient mediators of neuronal signalling in nervous systems. With recent advances in genomics/transcriptomics, an increasingly wide range of species has become accessible for molecular analysis. The deuterostomian invertebrates are of particular interest in this regard because they occupy an 'intermediate' position in animal phylogeny, bridging the gap between the well-studied model protostomian invertebrates (e.g. Drosophila melanogaster, Caenorhabditis elegans) and the vertebrates. Here we have identified 40 neuropeptide precursors in the starfish Asterias rubens, a deuterostomian invertebrate from the phylum Echinodermata. Importantly, these include kisspeptin-type and melanin-concentrating hormone-type precursors, which are the first to be discovered in a non-chordate species. Starfish tachykinin-type, somatostatin-type, pigment-dispersing factor-type and corticotropin-releasing hormone-type precursors are the first to be discovered in the echinoderm/ambulacrarian clade of the animal kingdom. Other precursors identified include vasopressin/oxytocin-type, gonadotropin-releasing hormone-type, thyrotropin-releasing hormone-type, calcitonin-type, cholecystokinin/gastrin-type, orexin-type, luqin-type, pedal peptide/orcokinin-type, glycoprotein hormone-type, bursicon-type, relaxin-type and insulin-like growth factor-type precursors. This is the most comprehensive identification of neuropeptide precursor proteins in an echinoderm to date, yielding new insights into the evolution of neuropeptide signalling systems. Furthermore, these data provide a basis for experimental analysis of neuropeptide function in the unique context of the decentralized, pentaradial echinoderm bauplan.


Assuntos
Evolução Molecular , Perfilação da Expressão Gênica , Neuropeptídeos/genética , Estrelas-do-Mar/genética , Transcriptoma , Sequência de Aminoácidos , Animais , Sequenciamento de Nucleotídeos em Larga Escala , Dados de Sequência Molecular , Família Multigênica , Filogenia , Alinhamento de Sequência , Estrelas-do-Mar/classificação
13.
Mitochondrial DNA A DNA Mapp Seq Anal ; 27(6): 4503-4509, 2016 11.
Artigo em Inglês | MEDLINE | ID: mdl-26593235

RESUMO

In North America, the Atlantic-Gulf discontinuity depicts genetic breaks between populations distributed along the Florida peninsula. This study examines 83 specimens of E. spinulosus obtained from seven locations along the Florida coast to examine phylogeographic patterns, population structure and examine historical demographic patterns. Analyses of 511 bp from the cytochrome oxidase 1 (COI) mitochondrial gene inferred no significant genetic structure for E. spinulosus along either side of the Florida coast nor was there a genetic discontinuity associated with a "Gulf-Atlantic" split. Population-based statistical analyses revealed no significant degree of genetic differentiation (Fst, p < 0.05) among populations, thus indicating substantial gene flow. Similarly, summary statistics (Fu's Fs, mismatch distributions) were significant indicating that there has been a population increase in the recent past. Recent range expansion, possibly due to a leading edge effect, combined with some level of contemporary larval mixing seems to be the main source of panmixia in this species.


Assuntos
Genoma Mitocondrial , Estrelas-do-Mar/genética , Animais , Oceano Atlântico , Complexo IV da Cadeia de Transporte de Elétrons/química , Complexo IV da Cadeia de Transporte de Elétrons/genética , Complexo IV da Cadeia de Transporte de Elétrons/metabolismo , Variação Genética , Genética Populacional , Golfo do México , Haplótipos , Filogenia , Filogeografia , Estrelas-do-Mar/classificação
14.
Sci Rep ; 5: 16885, 2015 Nov 23.
Artigo em Inglês | MEDLINE | ID: mdl-26592431

RESUMO

Coral reefs are in decline worldwide due to a combination of local and global causes. Over 40% of the recent coral loss on Australia's Great Barrier Reef (GBR) has been attributed to outbreaks of the coral-eating Crown-of-Thorns Seastar (CoTS). Testing of the hypotheses explaining these outbreaks is hampered by an inability to investigate the spatio-temporal distribution of larvae because they resemble other planktotrophic echinoderm larvae. We developed a genetic marker and tested it on 48 plankton samples collected during the 2014 spawning season in the northern GBR, and verified the method by PCR amplification of single larva. Surprisingly, most samples collected contained CoTS larvae. Larvae were detected 100 km south of current outbreaks of adult seastars, highlighting the potential for rapid expansion of the outbreak. A minimum estimate suggested that larvae numbers in the outbreak area (>10(10)) are about 4 orders of magnitude higher than adults (~10(6)) in the same area, implying that attempts to halt outbreaks by removing adults may be futile.


Assuntos
Distribuição Animal/fisiologia , DNA/genética , Comportamento Predatório/fisiologia , Reprodução/fisiologia , Estrelas-do-Mar/genética , Animais , Antozoários/crescimento & desenvolvimento , Austrália , Conservação dos Recursos Naturais , Recifes de Corais , DNA/isolamento & purificação , Feminino , Cadeia Alimentar , Marcadores Genéticos , Larva/genética , Masculino , Oceano Pacífico , Dinâmica Populacional , Estrelas-do-Mar/classificação
15.
Dev Genes Evol ; 225(6): 359-65, 2015 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-26432455

RESUMO

Homeobox genes cloned from the purple sea star Pisaster ochraceus (Phylum Echinodermata/Class Asteroidea) were used along with related sequences available from members of other representative animal phyla to generate molecular phylogenies for Distal-less/Dlx, Hox5, Hox7, and Hox9/10 homeobox genes. Phylogenetic relationships were inferred based on the predicted 60 amino acid homeodomain, using amino acid (AA) and nucleotide (NT) models as well as the recently developed codon substitution models of sequence evolution. The resulting phylogenetic trees were mostly congruent with the consensus species-tree, grouping these newly identified genes with those isolated from other Asteroidea. This analysis also allowed a preliminary comparison of the performance of codon models with that of NT and AA evolutionary models in the inference of homeobox phylogeny. We found that, overall, the NT models displayed low reliability in recovering major clades at the Superphylum/Phylum level, and that codon models were slightly more dependable than AA models. Remarkably, in the majority of cases, codon substitution models seemed to outperform both AA and NT models at both the Class level and homeobox paralogy-group level of classification.


Assuntos
Evolução Molecular , Proteínas de Homeodomínio/genética , Família Multigênica/genética , Filogenia , Estrelas-do-Mar/genética , Animais , Biblioteca Genômica , Proteínas de Homeodomínio/classificação , Modelos Genéticos , Dados de Sequência Molecular , Análise de Sequência de DNA , Especificidade da Espécie , Estrelas-do-Mar/classificação
16.
Rev. biol. trop ; 63(supl.2): 37-47, Apr.-Jun. 2015. tab
Artigo em Inglês | LILACS | ID: biblio-958157

RESUMO

Abstract Despite the important effort of knowing the Ophiuroidea diversity in the Mexican Pacific, some mistakes in the taxonomic nomenclature have pervaded through time. In order to clarify the latter, a checklist based on literature review of brittle stars from the Mexican Pacific is provided. We reviewed a total of 105 references that in total summarized 125 species of brittle stars from the Mexican Pacific (112) and the Gulf of California (97), belonging to two orders, 16 families and 50 genera. These records are higher than those reported on previous studies carried out in the area. México is the country with the highest number of brittle stars reported in the Tropical Eastern Pacific; this may be due to its exceptional oceanographic conditions, location and coastline extension. However, a total of 27 species reported in the literature were considered doubtful due to their general distributions and were not included in the checklist. Of the reported species, 35 have their type locality in the Mexican Pacific, corroborating the importance of the country in the Tropical Eastern Pacific in terms of Echinodermata diversity. Rev. Biol. Trop. 63 (Suppl. 2): 37-47. Epub 2015 June 01.


Resumen A pesar del importante esfuerzo en el conocimiento de la diversidad de ofiuroideos del Pacífico mexicano, algunos errores en la nomenclatura taxonómica han perseverado a través del tiempo. Con el objetivo de clarificar lo anterior, se provee una lista de especies de ofiuroideos del Pacífico Mexicano, basada en la revisión de literatura. Se revisó un total de 105 referencias que en total suman 125 especies pertenecientes a dos órdenes, 16 familias y 50 géneros de ofiuros del Pacífico Mexicano (112) y el Golfo de California (97). Estos reportes son mayores que otros estudios llevados a cabo en el área. México es el país con el mayor número de ofiuros reportados en el Pacífico Oriental Tropical; esto puede deberse a su excepcional condición oceanográfica, ubicación y extensión de línea de costa. Un total de 27 de las especies reportadas en la literatura fueron consideradas dudosas de acuerdo distribución geográfica por lo que no fueron incluidas en la lista. 35 especies poseen su localidad tipo en el Pacífico Mexicano, corroborando la importancia de México en el Pacífico Oriental Tropical en términos de diversidad de equinodermos.


Assuntos
Animais , Estrelas-do-Mar/classificação , Equinodermos/classificação , México
17.
Rev. biol. trop ; 63(supl.2): 361-381, Apr.-Jun. 2015. tab, graf
Artigo em Inglês | LILACS, SaludCR | ID: biblio-958183

RESUMO

Abstract The post-metamorphic stage is essential in the life history of marine invertebrates. During this period, animals are more vulnerable and suffer high mortality, which influences the distribution and abundance of adult populations. It is also during this period that major morphological changes happen in the individuals, complicating their taxonomic identification. The juvenile ophiuroids dominate the meiofauna in certain times of the year and at some places. However, they are ignored by most ecological studies due to identification difficulties. Here we describe the ontogeny of nine deep-sea species from the Southeast and South regions of Brazil, with the first record of morphological modifications for eight of them. Most organisms were collected 60 to 800 m deep, between December 1997, January, 1998 and March, 1998, during the REVIZEE-Score South / Benthos program. We also included additional material from the Zoology Museum of Unicamp (ZUEC). For descriptions and identifications of the different stages, the specimens were dried and photographed. The juveniles were identified by "backwards" process through the growth series of adults to smaller individuals, a backwards method that was successful in previous studies. Some individuals were mounted on aluminum stubs for scanning electron microscopy. The species were: Ophiacantha pentacrinus (Ophiacanthidae), Ophiomastus satelitae, Ophiomusium acuferum, Ophiomusium eburneum, Ophiomisidium tommasii, Ophiura ljungmani, Ophiura clemens (Ophiuridae), Amphiura complanata (Amphiuridae) and Ophiothrix rathbuni (Ophiotrichidae). Many species could be identified since their most juvenile stage. Some structures remain almost unaltered during the whole life. Rev. Biol. Trop. 63 (Suppl. 2): 361-381. Epub 2015 June 01.


Resumen La etapa post-metamórfica es esencial en la historia de vida de los invertebrados marinos. Durante este período, los animales son más vulnerables y sufren una elevada mortalidad, que influye en la distribución y abundancia de las poblaciones de los adultos. También es durante este período cuando grandes cambios morfológicos ocurren en los individuos, lo que complica su identificación taxonómica. Los ofiuroideos juveniles son el componente principal para la mayor parte de la composición de la meiofauna en ciertas épocas del año y en algunos lugares. Sin embargo, son ignorados por la mayoría de los estudios ecológicos debido a las dificultades de identificación. De esta manera, la descripción de las fases juveniles presenta mayor importancia, sobre todo en estudios relacionados con la dinámica poblacional y de composición de fauna. Este trabajo tiene como objetivo describir la ontogenia de nueve especies de aguas profundas de las regiones Sudeste y Sur de Brasil, siendo el primer registro en la literatura sobre cambios morfológicos -a partir del crecimiento- para ocho de ellos. La mayoría de los organismos se tomaron en el intervalo de 60 a 800 m de profundidad, entre diciembre de 1997, enero de 1998 y marzo de 1998, durante el programa REVIZEE Sur-Score / Bentos. También se incluyen en este estudio material adicional del Museo de Zoología de la Unicamp (ZUEC). Para las identificaciones y descripciones de las diferentes etapas, las muestras se secaron y fueron fotografiadas. Los juveniles fueron identificados por "al revés" el proceso de crecimiento a través de la serie desde adultos hasta los individuos de menores tallas, una metodología exitosa en estudios anteriores. Las especies seleccionadas para la descripción de la serie de crecimiento fueron escogidas de acuerdo a su abundancia relativa en diferentes etapas de desarrollo. Algunos individuos fueron montados en tacos de aluminio para la microscopía electrónica de barrido. Las especies se estudiadas fueron: Ophiacantha pentacrinus (Ophiacanthidae), Ophiomastus satelitae, Ophiomusium acuferum, Ophiomusium eburneum, Ophiomisidium tommasii, Ophiura ljungmani, Ophiura clemens (Ophiuridae), Amphiura complanata (Amphiuridae) y Ophiothrix rathbuni (Ophiotrichidae). El análisis del desarrollo post-metamórfico de los individuos reveló que muchas especies podrían ser identificadas desde sus etapas más juveniles, sobre todo a partir de caracteres morfológicos externos. Este estudio nos permite sostener que algunas estructuras permanecen casi inalteradas durante toda la vida del organismo, mientras que otras están sujetas a transformaciones. De este modo, se contribuye al conocimiento más amplio de algunas especies de ofiuroideos, con relación a la caracterización de sus diferentes etapas de desarrollo.


Assuntos
Animais , Estrelas-do-Mar/classificação , Fauna Bentônica/classificação , Classificação , Hidrobiologia/classificação , Invertebrados/classificação , Oceano Atlântico
18.
Rev. biol. trop ; 63(supl.2): 329-337, Apr.-Jun. 2015. tab
Artigo em Espanhol | LILACS, SaludCR | ID: biblio-958180

RESUMO

Resumen Como organismos bentónicos, estrellas de mar y erizos de mar están constantemente expuestos a un gran número de bacterias, hongos y virus, algunos de ellos potencialmente dañinos. Para sobrevivir, estos equinodermos dependen de su sistema inmunológico, que ha desarrollado una serie de compuestos que actúan como estrategias de defensa antimicrobianos. En este trabajo se evaluaron las actividades antibacteriana y antifúngica de los extractos metanólicos de la estrella de mar Oreaster reticulatus y de los erizos de mar Mellita quinquiesperforata y Diadema antillarum recolectados en el Caribe Cordobés, frente a las bacterias Escherichia coli, Staphylococcus aureus y Klebsiella pneumoniae, y frente a los hongos fitopatógenos Fusarium sp., Scleortium sp., y Rhizoctonia sp. Los resultados obtenidos mostraron que O. reticulatus y D. antillarum, son organismos capaces de producir compuestos con capacidad antibiótica generando inhibición bacteriana a bajas concentraciones (< 100 µg / ml), mientras que M. quinquiesperforata no presentó inhibición a ninguna de la concentraciones evaluadas. Específicamente, la cepa de S. aureus fue la que presentó mayor susceptibilidad frente a los extractos evaluados, es decir, los metabolitos producidos por los equinodermos inhiben con mayor facilidad las bacterias Gram +. Por su parte, solo el extracto de diclorometano de D. antillarum presentó inhibición frente a Fusarium sp., con porcentajes de inhibición de 78.2 % y 56.5 % a concentraciones de 2 000 y 100 µg / ml. Se encontró que las cepas de los hongos Sclerotium sp. y Rhizoctonia sp., presentaron resistencia frente a todos los.extractos de los organismos estudiados, con excepción del extracto de diclorometano de D. antillarum.


Abstract As benthic organisms, sea stars and sea urchins are constantly exposed to a large number of bacteria, fungi and viruses, some of them potentially harmful. To survive, these echinoderms depend on their immune system, which has developed a number of compounds which act as antimicrobial defense strategies. In this work, the antibacterial and antifungal activities of the extracts of the starfish Oreaster reticulatus and sea urchins Diadema antillarum and Mellita quinquiesperforata collected in the Caribbean Cordobés were evaluated against the bacteria Escherichia coli, Staphylococcus aureus and Klebsiella pneumoniae and against the phytopathogenic fungi Fusarium sp., Scleortium sp., and Rhizoctonia sp. Our results show that O. reticulatus and D. antillarum produce compounds producing bacterial inhibition at low concentrations (< 100 μg / ml), while, M. quinquiesperforata extracts showed no inhibition at any of the concentrations tested. Specifically, the strain of S. aureus was the one with greater susceptibility to the extracts evaluated, i.e. the metabolites produced by echinoderms inhibit more easily gram + bacteria. Only the D. antillarum dichloromethane affected Fusarium sp. with inhibition of 78.2 % and 56.5 % at concentrations of 2 000 and 100 μg / ml. Strains of the fungi Sclerotium sp. and Rhizoctonia sp. had resistance to all extracts. Rev. Biol. Trop. 63 (Suppl. 2): 329-337. Epub 2015 June 01.


Assuntos
Animais , Ouriços-do-Mar/classificação , Estrelas-do-Mar/classificação , Equinodermos/classificação , Antibacterianos , Fatores Biológicos
19.
Zootaxa ; 3941(4): 579-84, 2015 Apr 02.
Artigo em Inglês | MEDLINE | ID: mdl-25947530

RESUMO

A new species of asteriid sea star of the genus Leptasterias (Order Forcipulatida) is described from the nearshore waters of the Aleutian Islands. Leptaterias tatei sp. nov. is distinguished from Leptasterias stolacantha Fisher, 1930, by the characteristics of the spines and pedicellariae. Geographic distribution is discussed and a key to the five-rayed Leptasterias of the Aleutian Islands is provided.


Assuntos
Estrelas-do-Mar/classificação , Alaska , Distribuição Animal , Estruturas Animais/anatomia & histologia , Estruturas Animais/crescimento & desenvolvimento , Animais , Tamanho Corporal , Ecossistema , Tamanho do Órgão , Estrelas-do-Mar/anatomia & histologia , Estrelas-do-Mar/crescimento & desenvolvimento
20.
PLoS One ; 10(5): e0123331, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-25955729

RESUMO

Relationships within the class Asteroidea have remained controversial for almost 100 years and, despite many attempts to resolve this problem using molecular data, no consensus has yet emerged. Using two nuclear genes and a taxon sampling covering the major asteroid clades we show that non-phylogenetic signal created by three factors--Long Branch Attraction, compositional heterogeneity and the use of poorly fitting models of evolution--have confounded accurate estimation of phylogenetic relationships. To overcome the effect of this non-phylogenetic signal we analyse the data using non-homogeneous models, site stripping and the creation of subpartitions aimed to reduce or amplify the systematic error, and calculate Bayes Factor support for a selection of previously suggested topological arrangements of asteroid orders. We show that most of the previous alternative hypotheses are not supported in the most reliable data partitions, including the previously suggested placement of either Forcipulatida or Paxillosida as sister group to the other major branches. The best-supported solution places Velatida as the sister group to other asteroids, and the implications of this finding for the morphological evolution of asteroids are presented.


Assuntos
Filogenia , Estrelas-do-Mar/classificação , Animais , Teorema de Bayes , Modelos Biológicos
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